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NAGA alpha-N-acetylgalactosaminidase [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101381151, updated on 8-Mar-2024

Summary

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Gene symbol
NAGA
Gene description
alpha-N-acetylgalactosaminidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See NAGA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450332.1 (1577465..1585530)

NW_004450332.1Genomic Context describing neighboring genes Neighboring gene single-pass membrane protein with aspartate rich tail 1 Neighboring gene PH domain containing endocytic trafficking adaptor 2 Neighboring gene WBP2 N-terminal like Neighboring gene neuronal-specific septin-3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450332.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450332.1 Reference Oros_1.0 Primary Assembly

    Range
    1577465..1585530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012561371.1 → XP_012416825.1  alpha-N-acetylgalactosaminidase isoform X2

    See identical proteins and their annotated locations for XP_012416825.1

    UniProtKB/TrEMBL
    A0A2U3VQJ4
    Conserved Domains (1) summary
    cl07893
    Location:25 → 394
    AmyAc_family; Alpha amylase catalytic domain family

  2. XM_004397402.1 → XP_004397459.1  alpha-N-acetylgalactosaminidase isoform X2

    See identical proteins and their annotated locations for XP_004397459.1

    UniProtKB/TrEMBL
    A0A2U3VQJ4
    Conserved Domains (1) summary
    cl07893
    Location:25 → 394
    AmyAc_family; Alpha amylase catalytic domain family

  3. XM_012561372.1 → XP_012416826.1  alpha-N-acetylgalactosaminidase isoform X3

    Conserved Domains (1) summary
    cl07893
    Location:1 → 367
    AmyAc_family; Alpha amylase catalytic domain family

  4. XM_012561370.1 → XP_012416824.1  alpha-N-acetylgalactosaminidase isoform X1

    Conserved Domains (1) summary
    cl07893
    Location:33 → 402
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

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