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GPNMB glycoprotein nmb [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101380954, updated on 8-Mar-2024

Summary

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Gene symbol
GPNMB
Gene description
glycoprotein nmb
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See GPNMB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450331.1 (2002952..2024980)

NW_004450331.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 7 Neighboring gene nucleoporin 42 Neighboring gene mitochondrial assembly of ribosomal large subunit 1 Neighboring gene insulin like growth factor 2 mRNA binding protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450331.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane glycoprotein NMB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450331.1 Reference Oros_1.0 Primary Assembly

    Range
    2002952..2024980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004397329.2 → XP_004397386.1  transmembrane glycoprotein NMB isoform X2

    UniProtKB/TrEMBL
    A0A2U3VQC4
    Conserved Domains (1) summary
    cd00146
    Location:253 → 316
    PKD; polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is ...

  2. XM_004397328.2 → XP_004397385.1  transmembrane glycoprotein NMB isoform X1

    UniProtKB/TrEMBL
    A0A2U3VQM0
    Conserved Domains (1) summary
    cd00146
    Location:253 → 316
    PKD; polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is ...

  3. XM_004397330.2 → XP_004397387.1  transmembrane glycoprotein NMB isoform X3

    UniProtKB/TrEMBL
    A0A2U3VQC6
    Conserved Domains (1) summary
    cd00146
    Location:253 → 316
    PKD; polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is ...
Nucleotide Protein
Heading Accession and Version

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