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CLEC14A C-type lectin domain containing 14A [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101379132, updated on 8-Mar-2024

Summary

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Gene symbol
CLEC14A
Gene description
C-type lectin domain containing 14A
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See CLEC14A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450365.1 (2639661..2641292)

NW_004450365.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L39 pseudogene Neighboring gene 40S ribosomal protein S20 pseudogene Neighboring gene somatostatin receptor 1 Neighboring gene tetratricopeptide repeat domain 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450365.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 14 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450365.1 Reference Oros_1.0 Primary Assembly

    Range
    2639661..2641292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004399781.2 → XP_004399838.1  C-type lectin domain family 14 member A

    UniProtKB/TrEMBL
    A0A2U3VWI3
    Conserved Domains (2) summary
    pfam14670
    Location:255 → 287
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl02432
    Location:32 → 175
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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