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PIGO phosphatidylinositol glycan anchor biosynthesis class O [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101378306, updated on 8-Mar-2024

Summary

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Gene symbol
PIGO
Gene description
phosphatidylinositol glycan anchor biosynthesis class O
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See PIGO in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450270.1 (2377432..2384832, complement)

NW_004450270.1Genomic Context describing neighboring genes Neighboring gene valosin containing protein Neighboring gene FA complementation group G Neighboring gene stomatin like 2 Neighboring gene golgi-associated plant pathogenesis-related protein 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450270.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450270.1 Reference Oros_1.0 Primary Assembly

    Range
    2377432..2384832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012562327.1 → XP_012417781.1  GPI ethanolamine phosphate transferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A9B0G3L3
    Conserved Domains (2) summary
    COG1524
    Location:42 → 299
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    cd16023
    Location:65 → 344
    GPI_EPT_3; GPI ethanolamine phosphate transferase 3, PIG-O

  2. XM_004392238.2 → XP_004392295.1  GPI ethanolamine phosphate transferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A2U3VCJ7, A0A9B0G3L3
    Conserved Domains (2) summary
    COG1524
    Location:110 → 367
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    cd16023
    Location:133 → 412
    GPI_EPT_3; GPI ethanolamine phosphate transferase 3, PIG-O

  3. XM_004392240.2 → XP_004392297.1  GPI ethanolamine phosphate transferase 3 isoform X3

    UniProtKB/TrEMBL
    A0A2U3VD07
    Conserved Domains (2) summary
    COG1524
    Location:110 → 367
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    cd16023
    Location:133 → 412
    GPI_EPT_3; GPI ethanolamine phosphate transferase 3, PIG-O
Nucleotide Protein
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