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LYPLA1 lysophospholipase 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101377337, updated on 8-Mar-2024

Summary

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Gene symbol
LYPLA1
Gene description
lysophospholipase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See LYPLA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450727.1 (480150..509143, complement)

NW_004450727.1Genomic Context describing neighboring genes Neighboring gene regulator of G protein signaling 20 Neighboring gene transcription elongation factor A1 Neighboring gene mitochondrial ribosomal protein L15 Neighboring gene 40S ribosomal protein S18 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450727.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carboxylic ester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-protein thioesterase 1
Names
lysophospholipase I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450727.1 Reference Oros_1.0 Primary Assembly

    Range
    480150..509143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004410024.2 → XP_004410081.1  acyl-protein thioesterase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2U3WM74
    Conserved Domains (2) summary
    pfam02230
    Location:11 → 210
    Abhydrolase_2; Phospholipase/Carboxylesterase
    pfam12146
    Location:19 → 192
    Hydrolase_4; Serine aminopeptidase, S33

  2. XM_012565754.1 → XP_012421208.1  acyl-protein thioesterase 1 isoform X4

    Conserved Domains (1) summary
    pfam02230
    Location:11 → 192
    Abhydrolase_2; Phospholipase/Carboxylesterase

  3. XM_012565753.1 → XP_012421207.1  acyl-protein thioesterase 1 isoform X2

    Conserved Domains (2) summary
    COG0596
    Location:24 → 148
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    pfam02230
    Location:11 → 212
    Abhydrolase_2; Phospholipase/Carboxylesterase

  4. XM_012565755.1 → XP_012421209.1  acyl-protein thioesterase 1 isoform X5

    Conserved Domains (1) summary
    pfam02230
    Location:8 → 177
    Abhydrolase_2; Phospholipase/Carboxylesterase

  5. XM_004410023.2 → XP_004410080.1  acyl-protein thioesterase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WM73
    Conserved Domains (2) summary
    COG0596
    Location:24 → 148
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    pfam02230
    Location:11 → 226
    Abhydrolase_2; Phospholipase/Carboxylesterase
Nucleotide Protein
Heading Accession and Version

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