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ACER2 alkaline ceramidase 2 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101377033, updated on 8-Mar-2024

Summary

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Gene symbol
ACER2
Gene description
alkaline ceramidase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See ACER2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450525.1 (1483732..1511893, complement)

NW_004450525.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L31 pseudogene Neighboring gene solute carrier family 24 member 2 Neighboring gene host cell factor C1 regulator 1 pseudogene Neighboring gene DENN domain containing 4C Neighboring gene ribosomal protein S6 Neighboring gene 60S ribosomal protein L39 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450525.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450525.1 Reference Oros_1.0 Primary Assembly

    Range
    1483732..1511893 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004405663.1 → XP_004405720.1  alkaline ceramidase 2

    UniProtKB/TrEMBL
    A0A2U3WBD8
    Conserved Domains (1) summary
    pfam05875
    Location:13 → 261
    Ceramidase; Ceramidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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