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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101376959, updated on 8-Mar-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See B4GALNT3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450864.1 (839784..933682, complement)

NW_004450864.1Genomic Context describing neighboring genes Neighboring gene WNK lysine deficient protein kinase 1 Neighboring gene wiskott-Aldrich syndrome protein homolog Neighboring gene ninjurin 2 Neighboring gene coiled-coil domain containing 77 Neighboring gene lysine demethylase 5A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450864.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450864.1 Reference Oros_1.0 Primary Assembly

    Range
    839784..933682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004411958.1 → XP_004412015.1  beta-1,4-N-acetylgalactosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A2U3WS20
    Conserved Domains (2) summary
    pfam07691
    Location:143 → 277
    PA14; PA14 domain
    cl11394
    Location:789 → 985
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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