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GCSH glycine cleavage system protein H [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101376855, updated on 8-Mar-2024

Summary

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Gene symbol
GCSH
Gene description
glycine cleavage system protein H
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See GCSH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450269.1 (3355603..3369157, complement)

NW_004450269.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown open reading frame, human C16orf46 Neighboring gene ATM interactor Neighboring gene polycystin-1-like protein 2 Neighboring gene beta-carotene oxygenase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450269.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in glycine decarboxylation via glycine cleavage system IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of glycine cleavage complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycine cleavage system H protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450269.1 Reference Oros_1.0 Primary Assembly

    Range
    3355603..3369157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004392072.1 → XP_004392129.1  glycine cleavage system H protein, mitochondrial

    UniProtKB/TrEMBL
    A0A2U3VCL6
    Conserved Domains (1) summary
    PRK01202
    Location:51 → 170
    PRK01202; glycine cleavage system protein H; Provisional
Nucleotide Protein
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