U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

KIRREL3 kirre like nephrin family adhesion molecule 3 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101374242, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See KIRREL3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450662.1 (933007..1469077)

NW_004450662.1Genomic Context describing neighboring genes Neighboring gene ferritin heavy chain pseudogene Neighboring gene probable UDP-sugar transporter protein SLC35A4 Neighboring gene cell division cycle protein 20 homolog pseudogene Neighboring gene uncharacterized LOC105757895 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene decapping enzyme, scavenger

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004450662.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 3
Names
kin of IRRE like 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450662.1 Reference Oros_1.0 Primary Assembly

    Range
    933007..1469077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004408782.1 → XP_004408839.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WJ40
    Conserved Domains (7) summary
    cd05759
    Location:165 → 246
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:418 → 515
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:349 → 400
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:426 → 515
    IG_like; Immunoglobulin like
    pfam07679
    Location:335 → 416
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:254 → 331
    Ig_2; Immunoglobulin domain
    cl11960
    Location:52 → 143
    Ig; Immunoglobulin domain

  2. XM_012565377.1 → XP_012420831.1  kin of IRRE-like protein 3 isoform X2

    Conserved Domains (7) summary
    cd05759
    Location:132 → 213
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:385 → 482
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:316 → 367
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:393 → 482
    IG_like; Immunoglobulin like
    pfam07679
    Location:302 → 383
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:221 → 298
    Ig_2; Immunoglobulin domain
    cl11960
    Location:19 → 110
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.