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CAT catalase [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101373932, updated on 8-Mar-2024

Summary

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Gene symbol
CAT
Gene description
catalase
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See CAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450545.1 (872319..911994, complement)

NW_004450545.1Genomic Context describing neighboring genes Neighboring gene ETS homologous factor Neighboring gene E74 like ETS transcription factor 5 Neighboring gene uncharacterized LOC101385705 Neighboring gene ankyrin repeat and BTB domain containing 2 Neighboring gene N-acetyltransferase 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450545.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hydrogen peroxide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catalase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450545.1 Reference Oros_1.0 Primary Assembly

    Range
    872319..911994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004406088.1 → XP_004406145.1  catalase isoform X2

    UniProtKB/TrEMBL
    A0A2U3WCD5
    Conserved Domains (2) summary
    cd08156
    Location:68 → 497
    catalase_clade_3; Clade 3 of the heme-binding enzyme catalase
    COG0753
    Location:26 → 500
    KatE; Catalase [Inorganic ion transport and metabolism]

  2. XM_004406087.2 → XP_004406144.1  catalase isoform X1

    UniProtKB/TrEMBL
    A0A2U3WCD6
    Conserved Domains (2) summary
    cd08156
    Location:68 → 497
    catalase_clade_3; Clade 3 of the heme-binding enzyme catalase
    COG0753
    Location:26 → 500
    KatE; Catalase [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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