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GFRA1 GDNF family receptor alpha 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101373773, updated on 8-Mar-2024

Summary

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Gene symbol
GFRA1
Gene description
GDNF family receptor alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See GFRA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004451053.1 (455399..674876, complement)

NW_004451053.1Genomic Context describing neighboring genes Neighboring gene attractin-like protein 1 Neighboring gene ras GTPase-activating protein-binding protein 1 pseudogene Neighboring gene coiled-coil domain containing 172 Neighboring gene pancreatic lipase related protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004451053.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004451053.1 Reference Oros_1.0 Primary Assembly

    Range
    455399..674876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004413845.1 → XP_004413902.1  GDNF family receptor alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WWH6
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  2. XM_004413847.1 → XP_004413904.1  GDNF family receptor alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A2U3WWU2
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:243 → 337
    GDNF; GDNF/GAS1 domain

  3. XM_004413848.1 → XP_004413905.1  GDNF family receptor alpha-1 isoform X3

    UniProtKB/TrEMBL
    A0A2U3WWI8
    Conserved Domains (2) summary
    smart00907
    Location:29 → 111
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:238 → 332
    GDNF; GDNF/GAS1 domain
Nucleotide Protein
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