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RFNG RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101373562, updated on 8-Mar-2024

Summary

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Gene symbol
RFNG
Gene description
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See RFNG in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450479.1 (1035949..1039358)

NW_004450479.1Genomic Context describing neighboring genes Neighboring gene dihydrouridine synthase 1 like Neighboring gene G protein pathway suppressor 1 Neighboring gene carbonyl reductase [NADPH] 2-like Neighboring gene L-xylulose reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450479.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase radical fringe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450479.1 Reference Oros_1.0 Primary Assembly

    Range
    1035949..1039358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004404464.1 → XP_004404521.1  beta-1,3-N-acetylglucosaminyltransferase radical fringe

    UniProtKB/TrEMBL
    A0A2U3W8E8
    Conserved Domains (1) summary
    pfam02434
    Location:72 → 322
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

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