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PLD1 phospholipase D1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101369263, updated on 8-Mar-2024

Summary

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Gene symbol
PLD1
Gene description
phospholipase D1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See PLD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450278.1 (5960342..6154133, complement)

NW_004450278.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 2 Neighboring gene TRAF2 and NCK interacting kinase Neighboring gene 60S ribosomal protein L31 pseudogene Neighboring gene transmembrane protein 212

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450278.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microvillus assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450278.1 Reference Oros_1.0 Primary Assembly

    Range
    5960342..6154133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004393245.2 → XP_004393302.1  phospholipase D1 isoform X2

    UniProtKB/TrEMBL
    A0A2U3VF13
    Conserved Domains (5) summary
    cd07296
    Location:78 → 209
    PX_PLD1; The phosphoinositide binding Phox Homology domain of Phospholipase D1
    cd09844
    Location:716 → 897
    PLDc_vPLD1_2; Catalytic domain, repeat 2, of vertebrate phospholipase D1
    PLN02866
    Location:82 → 1021
    PLN02866; phospholipase D
    cd01254
    Location:197 → 326
    PH_PLD; Phospholipase D pleckstrin homology (PH) domain
    cl15239
    Location:352 → 502
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

  2. XM_004393244.2 → XP_004393301.1  phospholipase D1 isoform X1

    UniProtKB/TrEMBL
    A0A2U3VF30
    Conserved Domains (5) summary
    cd07296
    Location:78 → 209
    PX_PLD1; The phosphoinositide binding Phox Homology domain of Phospholipase D1
    cd09844
    Location:754 → 935
    PLDc_vPLD1_2; Catalytic domain, repeat 2, of vertebrate phospholipase D1
    PLN02866
    Location:82 → 1059
    PLN02866; phospholipase D
    cd01254
    Location:197 → 326
    PH_PLD; Phospholipase D pleckstrin homology (PH) domain
    cl15239
    Location:352 → 502
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins

  3. XM_004393246.2 → XP_004393303.1  phospholipase D1 isoform X3

    UniProtKB/TrEMBL
    A0A2U3VF46
    Conserved Domains (5) summary
    cd07296
    Location:78 → 209
    PX_PLD1; The phosphoinositide binding Phox Homology domain of Phospholipase D1
    cd09844
    Location:714 → 895
    PLDc_vPLD1_2; Catalytic domain, repeat 2, of vertebrate phospholipase D1
    PLN02866
    Location:82 → 1019
    PLN02866; phospholipase D
    cd01254
    Location:197 → 326
    PH_PLD; Phospholipase D pleckstrin homology (PH) domain
    cl15239
    Location:352 → 500
    PLDc_SF; Catalytic domain of phospholipase D superfamily proteins
Nucleotide Protein
Heading Accession and Version

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