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ACSM1 acyl-CoA synthetase medium chain family member 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101367835, updated on 8-Mar-2024

Summary

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Gene symbol
ACSM1
Gene description
acyl-CoA synthetase medium chain family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See ACSM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004452082.1 (1867..51163, complement)

NW_004452082.1Genomic Context describing neighboring genes Neighboring gene acyl-coenzyme A synthetase ACSM2B, mitochondrial Neighboring gene histone H1oo pseudogene Neighboring gene 40S ribosomal protein SA pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004452082.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A synthetase ACSM1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004452082.1 Reference Oros_1.0 Primary Assembly

    Range
    1867..51163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004417396.1 → XP_004417453.1  acyl-coenzyme A synthetase ACSM1, mitochondrial

    UniProtKB/TrEMBL
    A0A2U3X521
    Conserved Domains (2) summary
    PLN03051
    Location:75 → 497
    PLN03051; acyl-activating enzyme; Provisional
    cl17068
    Location:42 → 501
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

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