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ACADM acyl-CoA dehydrogenase medium chain [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101367783, updated on 8-Mar-2024

Summary

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Gene symbol
ACADM
Gene description
acyl-CoA dehydrogenase medium chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See ACADM in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450769.1 (89317..112321, complement)

NW_004450769.1Genomic Context describing neighboring genes Neighboring gene mutS homolog 4 Neighboring gene Rab geranylgeranyltransferase subunit beta Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene elongation factor 1-alpha 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450769.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables medium-chain fatty acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in medium-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
medium-chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-CoA dehydrogenase, C-4 to C-12 straight chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450769.1 Reference Oros_1.0 Primary Assembly

    Range
    89317..112321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004410826.1 → XP_004410883.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2U3WPB9
    Conserved Domains (2) summary
    cd01157
    Location:41 → 418
    MCAD; Medium chain acyl-CoA dehydrogenase
    COG1960
    Location:38 → 420
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]

  2. XM_012566015.1 → XP_012421469.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    Conserved Domains (2) summary
    cd01157
    Location:41 → 450
    MCAD; Medium chain acyl-CoA dehydrogenase
    COG1960
    Location:38 → 452
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]

  3. XM_012566016.1 → XP_012421470.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X3

    Conserved Domains (2) summary
    COG1960
    Location:2 → 290
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]
    cl09933
    Location:1 → 288
    ACAD; Acyl-CoA dehydrogenase
Nucleotide Protein
Heading Accession and Version

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