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GTDC1 glycosyltransferase like domain containing 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101367561, updated on 8-Mar-2024

Summary

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Gene symbol
GTDC1
Gene description
glycosyltransferase like domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See GTDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450531.1 (1484536..1876638)

NW_004450531.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L18a pseudogene Neighboring gene uncharacterized LOC105757728 Neighboring gene zinc finger E-box binding homeobox 2 Neighboring gene nascent polypeptide-associated complex subunit alpha pseudogene Neighboring gene proteasome activator complex subunit 1-like Neighboring gene Rho GTPase activating protein 15 Neighboring gene ubiquitin-conjugating enzyme E2 W pseudogene Neighboring gene kynureninase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450531.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase-like domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450531.1 Reference Oros_1.0 Primary Assembly

    Range
    1484536..1876638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004405788.1 → XP_004405845.1  glycosyltransferase-like domain-containing protein 1 isoform X3

    See identical proteins and their annotated locations for XP_004405845.1

    UniProtKB/TrEMBL
    A0A2U3WBM9
    Conserved Domains (1) summary
    pfam12038
    Location:2 → 164
    DUF3524; Domain of unknown function (DUF3524)

  2. XM_004405789.1 → XP_004405846.1  glycosyltransferase-like domain-containing protein 1 isoform X3

    See identical proteins and their annotated locations for XP_004405846.1

    UniProtKB/TrEMBL
    A0A2U3WBM9
    Conserved Domains (1) summary
    pfam12038
    Location:2 → 164
    DUF3524; Domain of unknown function (DUF3524)

  3. XM_004405786.2 → XP_004405843.1  glycosyltransferase-like domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WBL6
    Conserved Domains (3) summary
    COG0438
    Location:273 → 447
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam12038
    Location:2 → 164
    DUF3524; Domain of unknown function (DUF3524)
    cl10013
    Location:292 → 381
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

  4. XM_004405787.2 → XP_004405844.1  glycosyltransferase-like domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2U3WBM1
    Conserved Domains (1) summary
    pfam12038
    Location:2 → 164
    DUF3524; Domain of unknown function (DUF3524)
Nucleotide Protein
Heading Accession and Version

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