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CHST9 carbohydrate sulfotransferase 9 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101367295, updated on 8-Mar-2024

Summary

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Gene symbol
CHST9
Gene description
carbohydrate sulfotransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See CHST9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450813.1 (220676..428417)

NW_004450813.1Genomic Context describing neighboring genes Neighboring gene aquaporin 4 Neighboring gene ATP synthase subunit d, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450813.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450813.1 Reference Oros_1.0 Primary Assembly

    Range
    220676..428417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004411321.1 → XP_004411378.1  carbohydrate sulfotransferase 9 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WQ96
    Conserved Domains (1) summary
    pfam03567
    Location:203 → 432
    Sulfotransfer_2; Sulfotransferase family

  2. XM_004411322.2 → XP_004411379.1  carbohydrate sulfotransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A2U3WQ98
    Conserved Domains (1) summary
    pfam03567
    Location:190 → 419
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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