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PXYLP1 2-phosphoxylose phosphatase 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101366173, updated on 8-Mar-2024

Summary

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Gene symbol
PXYLP1
Gene description
2-phosphoxylose phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Also known as
ACPL2
Orthologs
human mouse all
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Genomic context

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See PXYLP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450330.1 (620531..654014)

NW_004450330.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L7-like 1 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 4 Neighboring gene zinc finger and BTB domain containing 38 Neighboring gene RAS p21 protein activator 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450330.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-phosphoxylose phosphatase 1
Names
acid phosphatase-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450330.1 Reference Oros_1.0 Primary Assembly

    Range
    620531..654014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004397283.1 → XP_004397340.1  2-phosphoxylose phosphatase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2U3VQ69
    Conserved Domains (1) summary
    cl11399
    Location:87 → 424
    HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction

  2. XM_004397284.1 → XP_004397341.1  2-phosphoxylose phosphatase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2U3VQ78
    Conserved Domains (1) summary
    cl11399
    Location:71 → 408
    HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction
Nucleotide Protein
Heading Accession and Version

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