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GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101365322, updated on 8-Mar-2024

Summary

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Gene symbol
GALNT11
Gene description
polypeptide N-acetylgalactosaminyltransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See GALNT11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450664.1 (1010090..1038933)

NW_004450664.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-1A chain-like Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 5 Neighboring gene lysine methyltransferase 2C Neighboring gene chaperonin containing TCP1 subunit 8 like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450664.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 11
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450664.1 Reference Oros_1.0 Primary Assembly

    Range
    1010090..1038933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004408837.2 → XP_004408894.1  polypeptide N-acetylgalactosaminyltransferase 11

    UniProtKB/TrEMBL
    A0A2U3WJ93
    Conserved Domains (4) summary
    cd02510
    Location:156 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:489 → 608
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:485 → 606
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:156 → 384
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
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