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PGS1 phosphatidylglycerophosphate synthase 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101365082, updated on 8-Mar-2024

Summary

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Gene symbol
PGS1
Gene description
phosphatidylglycerophosphate synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See PGS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004451435.1 (130320..169929)

NW_004451435.1Genomic Context describing neighboring genes Neighboring gene probable low-specificity L-threonine aldolase 2 Neighboring gene suppressor of cytokine signaling 3 Neighboring gene dynein axonemal heavy chain 17 Neighboring gene cytohesin 1 Neighboring gene ubiquitin specific peptidase 36

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004451435.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004451435.1 Reference Oros_1.0 Primary Assembly

    Range
    130320..169929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004416244.2 → XP_004416301.1  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial

    See identical proteins and their annotated locations for XP_004416301.1

    UniProtKB/TrEMBL
    A0A2U3X2G4
    Conserved Domains (3) summary
    cd09135
    Location:96 → 269
    PLDc_PGS1_euk_1; Catalytic domain, repeat 1, of eukaryotic PhosphatidylGlycerophosphate Synthases
    cd09137
    Location:349 → 508
    PLDc_PGS1_euk_2; Catalytic domain, repeat 2, of eukaryotic phosphatidylglycerophosphate synthases
    pfam13091
    Location:113 → 268
    PLDc_2; PLD-like domain

  2. XM_004416245.1 → XP_004416302.1  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial

    See identical proteins and their annotated locations for XP_004416302.1

    UniProtKB/TrEMBL
    A0A2U3X2G4
    Conserved Domains (3) summary
    cd09135
    Location:96 → 269
    PLDc_PGS1_euk_1; Catalytic domain, repeat 1, of eukaryotic PhosphatidylGlycerophosphate Synthases
    cd09137
    Location:349 → 508
    PLDc_PGS1_euk_2; Catalytic domain, repeat 2, of eukaryotic phosphatidylglycerophosphate synthases
    pfam13091
    Location:113 → 268
    PLDc_2; PLD-like domain

RNA

  1. XR_001122485.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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