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SLC35F3 solute carrier family 35 member F3 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101365019, updated on 8-Mar-2024

Summary

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Gene symbol
SLC35F3
Gene description
solute carrier family 35 member F3
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See SLC35F3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450650.1 (529692..894159, complement)

NW_004450650.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 6 homolog Neighboring gene ADP/ATP translocase 2 pseudogene Neighboring gene nitric oxide synthase-interacting protein-like Neighboring gene potassium two pore domain channel subfamily K member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450650.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in thiamine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative thiamine transporter SLC35F3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450650.1 Reference Oros_1.0 Primary Assembly

    Range
    529692..894159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004408634.1 → XP_004408691.1  putative thiamine transporter SLC35F3 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WIQ3
    Conserved Domains (1) summary
    pfam00892
    Location:136 → 292
    EamA; EamA-like transporter family

  2. XM_012565334.1 → XP_012420788.1  putative thiamine transporter SLC35F3 isoform X2

    Conserved Domains (1) summary
    pfam00892
    Location:67 → 223
    EamA; EamA-like transporter family
Nucleotide Protein
Heading Accession and Version

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