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STT3A STT3 oligosaccharyltransferase complex catalytic subunit A [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101363111, updated on 8-Mar-2024

Summary

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Gene symbol
STT3A
Gene description
STT3 oligosaccharyltransferase complex catalytic subunit A
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See STT3A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004451878.1 (89722..112127, complement)

NW_004451878.1Genomic Context describing neighboring genes Neighboring gene acrosomal vesicle protein 1 Neighboring gene checkpoint kinase 1 Neighboring gene EI24 autophagy associated transmembrane protein Neighboring gene fasciculation and elongation protein zeta 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004451878.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
Names
STT3A, catalytic subunit of the oligosaccharyltransferase complex

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004451878.1 Reference Oros_1.0 Primary Assembly

    Range
    89722..112127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004417209.2 → XP_004417266.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X1

    UniProtKB/TrEMBL
    A0A2U3X4N5
    Conserved Domains (2) summary
    COG1287
    Location:15 → 686
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
    pfam02516
    Location:15 → 469
    STT3; Oligosaccharyl transferase STT3 subunit

  2. XM_004417208.2 → XP_004417265.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A isoform X2

    UniProtKB/TrEMBL
    A0A2U3X4N7
    Conserved Domains (1) summary
    pfam02516
    Location:17 → 484
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
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