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COLGALT2 collagen beta(1-O)galactosyltransferase 2 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101362716, updated on 8-Mar-2024

Summary

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Gene symbol
COLGALT2
Gene description
collagen beta(1-O)galactosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See COLGALT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450323.1 (4629941..4733279, complement)

NW_004450323.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-alpha 1 pseudogene Neighboring gene ral guanine nucleotide dissociation stimulator like 1 Neighboring gene apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 Neighboring gene tRNA splicing endonuclease subunit 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450323.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450323.1 Reference Oros_1.0 Primary Assembly

    Range
    4629941..4733279 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004396885.2 → XP_004396942.1  procollagen galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A2U3VPA0
    Conserved Domains (2) summary
    pfam13704
    Location:62 → 175
    Glyco_tranf_2_4; Glycosyl transferase family 2
    cl01298
    Location:341 → 526
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...
Nucleotide Protein
Heading Accession and Version

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