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LOC101358508 galactoside 2-alpha-L-fucosyltransferase 2 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101358508, updated on 31-Jan-2024

Summary

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Gene symbol
LOC101358508
Gene description
galactoside 2-alpha-L-fucosyltransferase 2
See related
EnsemblRapid:ENSTMLG00000004959
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
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Genomic context

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See LOC101358508 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444023.1 (4640782..4642091, complement)

NW_004444023.1Genomic Context describing neighboring genes Neighboring gene Ras interacting protein 1 Neighboring gene MEF2 activating motif and SAP domain containing transcriptional regulator Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene galactoside 2-alpha-L-fucosyltransferase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444023 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactoside 2-alpha-L-fucosyltransferase 2
Names
fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444023.1 Reference TriManLat1.0 Primary Assembly

    Range
    4640782..4642091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004381684.3 → XP_004381741.2  galactoside 2-alpha-L-fucosyltransferase 2

    UniProtKB/TrEMBL
    A0A2Y9DWG7
    Related
    ENSTMLP00000006735.1, ENSTMLT00000007295.1
    Conserved Domains (1) summary
    pfam01531
    Location:46 → 359
    Glyco_transf_11; Glycosyl transferase family 11
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases