U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHST7 carbohydrate sulfotransferase 7 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101357632, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CHST7
Gene description
carbohydrate sulfotransferase 7
See related
EnsemblRapid:ENSTMLG00000012290
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHST7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004443982.1 (6673320..6717733, complement)

NW_004443982.1Genomic Context describing neighboring genes Neighboring gene CXXC-type zinc finger protein 1-like Neighboring gene solute carrier family 9 member A7 Neighboring gene lupus La protein homolog Neighboring gene uncharacterized LOC111820691

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004443982 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carbohydrate sulfotransferase 7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004443982.1 Reference TriManLat1.0 Primary Assembly

    Range
    6673320..6717733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004376908.3 → XP_004376965.1  carbohydrate sulfotransferase 7

    UniProtKB/TrEMBL
    A0A2Y9R7U2

  2. XM_023731895.1 → XP_023587663.1  carbohydrate sulfotransferase 7

    UniProtKB/TrEMBL
    A0A2Y9R7U2
    Related
    ENSTMLP00000017261.1, ENSTMLT00000018499.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.