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CHSY3 chondroitin sulfate synthase 3 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101356783, updated on 8-Mar-2024

Summary

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Gene symbol
CHSY3
Gene description
chondroitin sulfate synthase 3
See related
EnsemblRapid:ENSTMLG00000016826
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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See CHSY3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444288.1 (348613..640560, complement)

NW_004444288.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444288 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444288.1 Reference TriManLat1.0 Primary Assembly

    Range
    348613..640560 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004390915.3 → XP_004390972.1  chondroitin sulfate synthase 3

    UniProtKB/TrEMBL
    A0A2Y9ECC6
    Related
    ENSTMLP00000023548.1, ENSTMLT00000025245.1
    Conserved Domains (2) summary
    pfam05679
    Location:330 → 866
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:173 → 400
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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