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MPDU1 mannose-P-dolichol utilization defect 1 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101353145, updated on 8-Mar-2024

Summary

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Gene symbol
MPDU1
Gene description
mannose-P-dolichol utilization defect 1
See related
EnsemblRapid:ENSTMLG00000001671
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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See MPDU1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004443976.1 (11964711..11971496, complement)

NW_004443976.1Genomic Context describing neighboring genes Neighboring gene FMR1 autosomal homolog 2 Neighboring gene SRY-box transcription factor 15 Neighboring gene CD68 molecule Neighboring gene small nucleolar RNA SNORA67 Neighboring gene eukaryotic translation initiation factor 4A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004443976 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-P-dolichol utilization defect 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004443976.1 Reference TriManLat1.0 Primary Assembly

    Range
    11964711..11971496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004376026.3 → XP_004376083.2  mannose-P-dolichol utilization defect 1 protein

    UniProtKB/TrEMBL
    A0A2Y9DKU5
    Related
    ENSTMLP00000002335.1, ENSTMLT00000002536.1
    Conserved Domains (3) summary
    smart00679
    Location:186 → 217
    CTNS; Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins
    TIGR00951
    Location:59 → 254
    2A43; Lysosomal Cystine Transporter
    pfam04193
    Location:62 → 120
    PQ-loop; PQ loop repeat
Nucleotide Protein
Heading Accession and Version

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