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GXYLT1 glucoside xylosyltransferase 1 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101352474, updated on 8-Mar-2024

Summary

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Gene symbol
GXYLT1
Gene description
glucoside xylosyltransferase 1
See related
EnsemblRapid:ENSTMLG00000008316
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444059.1 (6691733..6748720)

NW_004444059.1Genomic Context describing neighboring genes Neighboring gene CDGSH iron-sulfur domain-containing protein 2-like Neighboring gene quinone oxidoreductase pseudogene Neighboring gene YY1 associated factor 2 Neighboring gene PDZ domain containing ring finger 4 Neighboring gene contactin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444059 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444059.1 Reference TriManLat1.0 Primary Assembly

    Range
    6691733..6748720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004384580.2 → XP_004384637.1  glucoside xylosyltransferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A2Y9E209
    Conserved Domains (2) summary
    cd06430
    Location:116 → 417
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
    COG1442
    Location:132 → 427
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  2. XM_023738868.1 → XP_023594636.1  glucoside xylosyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2Y9RLX5
    Conserved Domains (1) summary
    cl11394
    Location:116 → 375
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_023738866.1 → XP_023594634.1  glucoside xylosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9RRT5
    Related
    ENSTMLP00000011562.1, ENSTMLT00000012441.1
    Conserved Domains (1) summary
    cd06430
    Location:116 → 417
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function

  4. XM_004384581.2 → XP_004384638.1  glucoside xylosyltransferase 1 isoform X5

    UniProtKB/TrEMBL
    A0A2Y9E072
    Related
    ENSTMLP00000011600.1, ENSTMLT00000012482.1
    Conserved Domains (2) summary
    cd06430
    Location:85 → 386
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
    COG1442
    Location:101 → 396
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  5. XM_023738867.1 → XP_023594635.1  glucoside xylosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9RHD2
    Conserved Domains (1) summary
    cd06430
    Location:85 → 386
    GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

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