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A3GALT2 alpha 1,3-galactosyltransferase 2 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101352341, updated on 8-Mar-2024

Summary

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Gene symbol
A3GALT2
Gene description
alpha 1,3-galactosyltransferase 2
See related
EnsemblRapid:ENSTMLG00000016297
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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See A3GALT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004443951.1 (24511601..24526400)

NW_004443951.1Genomic Context describing neighboring genes Neighboring gene toll-like receptor 12 Neighboring gene U6 spliceosomal RNA Neighboring gene polyhomeotic homolog 2 Neighboring gene uncharacterized LOC111819658 Neighboring gene zinc finger protein 362 Neighboring gene tripartite motif containing 62

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004443951 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004443951.1 Reference TriManLat1.0 Primary Assembly

    Range
    24511601..24526400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004371976.2 → XP_004372033.1  alpha-1,3-galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9DCX9
    Related
    ENSTMLP00000022787.1, ENSTMLT00000024431.1
    Conserved Domains (1) summary
    cd02515
    Location:68 → 339
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens

  2. XM_023727265.1 → XP_023583033.1  alpha-1,3-galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9QUR9
    Conserved Domains (1) summary
    cd02515
    Location:25 → 296
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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