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LOC101349604 histone H2A type 1 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101349604, updated on 1-Feb-2024

Summary

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Gene symbol
LOC101349604
Gene description
histone H2A type 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
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Genomic context

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See LOC101349604 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444281.1 (130404..131418, complement)

NW_004444281.1Genomic Context describing neighboring genes Neighboring gene histone H2B type 1-K Neighboring gene histone H4 Neighboring gene histone H3.1-like Neighboring gene histone H2B type 1-J Neighboring gene uncharacterized LOC111819282

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444281 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2A type 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444281.1 Reference TriManLat1.0 Primary Assembly

    Range
    130404..131418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023725664.1 → XP_023581432.1  histone H2A type 1 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9E628
    Conserved Domains (1) summary
    PTZ00017
    Location:1 → 130
    PTZ00017; histone H2A; Provisional

  2. XM_023725663.1 → XP_023581431.1  histone H2A type 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9E628
    Conserved Domains (1) summary
    PTZ00017
    Location:1 → 130
    PTZ00017; histone H2A; Provisional
Nucleotide Protein
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