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ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101348849, updated on 8-Mar-2024

Summary

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Gene symbol
ST6GALNAC6
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
See related
EnsemblRapid:ENSTMLG00000006292
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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See ST6GALNAC6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004443974.1 (12314612..12326317, complement)

NW_004443974.1Genomic Context describing neighboring genes Neighboring gene endoglin Neighboring gene adenylate kinase 1 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase like 1 Neighboring gene dolichyl-phosphate mannosyltransferase subunit 2, regulatory

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004443974 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004443974.1 Reference TriManLat1.0 Primary Assembly

    Range
    12314612..12326317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023730765.1 → XP_023586533.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9R4K3
    Conserved Domains (1) summary
    pfam00777
    Location:62 → 232
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_023730766.1 → XP_023586534.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9QSX9
    Conserved Domains (1) summary
    pfam00777
    Location:68 → 253
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_023730767.1 → XP_023586535.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9QSX9
    Related
    ENSTMLP00000008669.1, ENSTMLT00000009360.1
    Conserved Domains (1) summary
    pfam00777
    Location:68 → 253
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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