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LOC101344812 histone H2AX [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101344812, updated on 8-Mar-2024

Summary

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Gene symbol
LOC101344812
Gene description
histone H2AX
See related
EnsemblRapid:ENSTMLG00000019205
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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See LOC101344812 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444079.1 (2457556..2458125)

NW_004444079.1Genomic Context describing neighboring genes Neighboring gene C2CD2 like Neighboring gene dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 Neighboring gene hydroxymethylbilane synthase Neighboring gene VPS11 core subunit of CORVET and HOPS complexes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444079 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2AX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444079.1 Reference TriManLat1.0 Primary Assembly

    Range
    2457556..2458125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004385635.2 → XP_004385692.1  histone H2AX

    UniProtKB/TrEMBL
    A0A2Y9E3F4
    Related
    ENSTMLP00000026914.1, ENSTMLT00000028868.1
    Conserved Domains (2) summary
    PTZ00017
    Location:1 → 130
    PTZ00017; histone H2A; Provisional
    cd00074
    Location:6 → 120
    H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...
Nucleotide Protein
Heading Accession and Version

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