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LOC101343723 histone H2A type 3-like [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101343723, updated on 1-Feb-2024

Summary

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Gene symbol
LOC101343723
Gene description
histone H2A type 3-like
See related
EnsemblRapid:ENSTMLG00000008649
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
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Genomic context

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See LOC101343723 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444064.1 (532888..535231, complement)

NW_004444064.1Genomic Context describing neighboring genes Neighboring gene butyrophilin subfamily 1 member A1-like Neighboring gene histone H4 Neighboring gene ring finger protein 187 Neighboring gene histone H2B type 3-B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444064 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2A type 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444064.1 Reference TriManLat1.0 Primary Assembly

    Range
    532888..535231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023739039.1 → XP_023594807.1  histone H2A type 3-like

    UniProtKB/TrEMBL
    A0A2Y9RK30
    Related
    ENSTMLP00000012023.1, ENSTMLT00000012919.1
    Conserved Domains (1) summary
    PTZ00017
    Location:1 → 130
    PTZ00017; histone H2A; Provisional
Nucleotide Protein
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