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EWSR1 EWS RNA binding protein 1 [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101333377, updated on 8-Mar-2024

Summary

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Gene symbol
EWSR1
Gene description
EWS RNA binding protein 1
See related
EnsemblRapid:ENSTTRG00000011881
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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See EWSR1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
17
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 13 NC_047046.1 (22123488..22151233)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017842185.1 (1336685..1344167, complement)

Chromosome 13 - NC_047046.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene EMI domain containing 1 Neighboring gene rhomboid domain containing 3 Neighboring gene growth arrest specific 2 like 1 Neighboring gene RAS like family 10 member A Neighboring gene small nucleolar RNA SNORD125 Neighboring gene adaptor related protein complex 1 subunit beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein EWS

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047046.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    22123488..22151233
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033837128.1 → XP_033693019.1  RNA-binding protein EWS isoform X1

    UniProtKB/TrEMBL
    A0A6J3PS77
    Related
    ENSTTRP00000032368.1, ENSTTRT00000041385.1
    Conserved Domains (4) summary
    PHA03247
    Location:71 → 206
    PHA03247; large tegument protein UL36; Provisional
    sd00025
    Location:522 → 543
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:518 → 547
    zf-RanBP; Zn-finger in Ran binding protein and others
    cd12533
    Location:361 → 444
    RRM_EWS; RNA recognition motif (RRM) found in vertebrate Ewing Sarcoma Protein (EWS)

  2. XM_033837129.1 → XP_033693020.1  RNA-binding protein EWS isoform X2

    UniProtKB/TrEMBL
    A0A6J3PSC2
    Related
    ENSTTRP00000011269.2, ENSTTRT00000011880.2
    Conserved Domains (4) summary
    PHA03247
    Location:71 → 206
    PHA03247; large tegument protein UL36; Provisional
    sd00025
    Location:521 → 542
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:517 → 546
    zf-RanBP; Zn-finger in Ran binding protein and others
    cd12533
    Location:360 → 443
    RRM_EWS; RNA recognition motif (RRM) found in vertebrate Ewing Sarcoma Protein (EWS)
Nucleotide Protein
Heading Accession and Version

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