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SLC1A4 solute carrier family 1 member 4 [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101315939, updated on 8-Mar-2024

Summary

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Gene symbol
SLC1A4
Gene description
solute carrier family 1 member 4
See related
EnsemblRapid:ENSTTRG00000008269
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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See SLC1A4 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
19
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 14 NC_047047.1 (34691423..34811185, complement)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017843712.1 (9537170..9647754, complement)

Chromosome 14 - NC_047047.1Genomic Context describing neighboring genes Neighboring gene RAB1A, member RAS oncogene family Neighboring gene centrosomal protein 68 Neighboring gene uncharacterized LOC109551218 Neighboring gene uncharacterized LOC117307875 Neighboring gene uncharacterized LOC109551186 Neighboring gene uncharacterized LOC109551187 Neighboring gene uncharacterized LOC117307876

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-aspartate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-serine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-threonine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-glutamate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in L-serine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral amino acid transporter A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047047.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    34691423..34811185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033838446.1 → XP_033694337.1  neutral amino acid transporter A isoform X1

    UniProtKB/TrEMBL
    A0A6J3PWG7
    Related
    ENSTTRP00000007826.1, ENSTTRT00000008264.2
    Conserved Domains (1) summary
    pfam00375
    Location:44 → 477
    SDF; Sodium:dicarboxylate symporter family

  2. XM_019942912.2 → XP_019798471.1  neutral amino acid transporter A isoform X2

    UniProtKB/TrEMBL
    A0A2U4BZ30
    Conserved Domains (1) summary
    pfam00375
    Location:2 → 257
    SDF; Sodium:dicarboxylate symporter family
Nucleotide Protein
Heading Accession and Version

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