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LOC101311007 anthocyanidin 3-O-glucosyltransferase 5-like [ Fragaria vesca (wild strawberry) ]

Gene ID: 101311007, updated on 11-Jan-2024

Summary

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Gene symbol
LOC101311007
Gene description
anthocyanidin 3-O-glucosyltransferase 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Fragaria vesca
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Genomic context

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See LOC101311007 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
1
Annotation release Status Assembly LG Location
101 current FraVesHawaii_1.0 (GCF_000184155.1) LG5 NC_020495.1 (26707226..26708978)

Linkage Group LG5 - NC_020495.1Genomic Context describing neighboring genes Neighboring gene BES1/BZR1 homolog protein 2 Neighboring gene anthocyanidin 3-O-glucosyltransferase 5-like Neighboring gene probable caffeoyl-CoA O-methyltransferase At4g26220 Neighboring gene probable caffeoyl-CoA O-methyltransferase At4g26220

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020495.1 Chromosome LG5 Reference FraVesHawaii_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthocyanidin 3-O-glucosyltransferase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fragaria vesca Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FraVesHawaii_1.0 Primary Assembly

Genomic

  1. NC_020495.1 Reference FraVesHawaii_1.0 Primary Assembly

    Range
    26707226..26708978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004301835.2 → XP_004301883.2  anthocyanidin 3-O-glucosyltransferase 5-like

    Conserved Domains (2) summary
    TIGR01426
    Location:16 → 442
    MGT; glycosyltransferase, MGT family
    cl10013
    Location:3 → 483
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
Heading Accession and Version

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