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MSMO1 methylsterol monooxygenase 1 [ Orcinus orca (killer whale) ]

Gene ID: 101289371, updated on 8-Mar-2024

Summary

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Gene symbol
MSMO1
Gene description
methylsterol monooxygenase 1
See related
EnsemblRapid:ENSOORG00010022786
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See MSMO1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 4 NC_064562.1 (37193162..37215917, complement)

Chromosome 4 - NC_064562.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 19, mitochondrial-like Neighboring gene ubiquitin-conjugating enzyme E2 K-like Neighboring gene carboxypeptidase E Neighboring gene uncharacterized LOC125964228 Neighboring gene kelch like family member 2 Neighboring gene transmembrane protein 192

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064562.1 Chromosome 4 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylsterol monooxygenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064562.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    37193162..37215917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004283986.3 → XP_004284034.1  methylsterol monooxygenase 1

    Related
    ENSOORP00010030207.1, ENSOORT00010034100.1
    Conserved Domains (1) summary
    COG3000
    Location:60 → 274
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]

  2. XM_033413349.2 → XP_033269240.1  methylsterol monooxygenase 1

    Conserved Domains (1) summary
    COG3000
    Location:60 → 274
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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