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B4GALT6 beta-1,4-galactosyltransferase 6 [ Orcinus orca (killer whale) ]

Gene ID: 101289247, updated on 8-Mar-2024

Summary

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Gene symbol
B4GALT6
Gene description
beta-1,4-galactosyltransferase 6
See related
EnsemblRapid:ENSOORG00010001837
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See B4GALT6 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 15 NC_064573.1 (43060193..43126891)

Chromosome 15 - NC_064573.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene gamma-secretase subunit APH-1B-like Neighboring gene transthyretin Neighboring gene desmoglein 2 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064573.1 Chromosome 15 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064573.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    43060193..43126891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049698150.1 → XP_049554107.1  beta-1,4-galactosyltransferase 6 isoform X2

    Related
    ENSOORP00010001678.1, ENSOORT00010002441.1

  2. XM_049698149.1 → XP_049554106.1  beta-1,4-galactosyltransferase 6 isoform X1

    Related
    ENSOORP00010001680.1, ENSOORT00010002443.1

  3. XM_049698152.1 → XP_049554109.1  beta-1,4-galactosyltransferase 6 isoform X4

  4. XM_049698153.1 → XP_049554110.1  beta-1,4-galactosyltransferase 6 isoform X5

  5. XM_049698151.1 → XP_049554108.1  beta-1,4-galactosyltransferase 6 isoform X3

Nucleotide Protein
Heading Accession and Version

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