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C1GALT1C1 C1GALT1 specific chaperone 1 [ Orcinus orca (killer whale) ]

Gene ID: 101289050, updated on 8-Mar-2024

Summary

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Gene symbol
C1GALT1C1
Gene description
C1GALT1 specific chaperone 1
See related
EnsemblRapid:ENSOORG00010010710
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See C1GALT1C1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) X NC_064580.1 (104610295..104615192, complement)

Chromosome X - NC_064580.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125963039 Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene MCTS1 re-initiation and release factor Neighboring gene uncharacterized LOC117198686 Neighboring gene transfer RNA alanine (anticodon CGC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064580.1 Chromosome X Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064580.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    104610295..104615192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004285590.4 → XP_004285638.1  C1GALT1-specific chaperone 1

    Related
    ENSOORP00010013420.1, ENSOORT00010015732.1
Nucleotide Protein
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