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PRPS1L1 phosphoribosyl pyrophosphate synthetase 1 like 1 [ Orcinus orca (killer whale) ]

Gene ID: 101287276, updated on 8-Mar-2024

Summary

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Gene symbol
PRPS1L1
Gene description
phosphoribosyl pyrophosphate synthetase 1 like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See PRPS1L1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 9 NC_064567.1 (70271333..70272295, complement)

Chromosome 9 - NC_064567.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125965338 Neighboring gene phosphoglycerate mutase 1-like Neighboring gene sorting nexin 13 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC125965340 Neighboring gene histone deacetylase 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064567.1 Chromosome 9 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribose phosphate diphosphokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 5-phosphoribose 1-diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribose phosphate diphosphokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ribose-phosphate pyrophosphokinase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064567.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    70271333..70272295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033437712.2 → XP_033293603.1  LOW QUALITY PROTEIN: ribose-phosphate pyrophosphokinase 3

    Conserved Domains (1) summary
    COG0462
    Location:3 → 310
    PrsA; Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism, Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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