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POFUT2 protein O-fucosyltransferase 2 [ Orcinus orca (killer whale) ]

Gene ID: 101286585, updated on 8-Mar-2024

Summary

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Gene symbol
POFUT2
Gene description
protein O-fucosyltransferase 2
See related
EnsemblRapid:ENSOORG00010007613
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See POFUT2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 5 NC_064563.1 (148057200..148069488, complement)

Chromosome 5 - NC_064563.1Genomic Context describing neighboring genes Neighboring gene putative olfactory receptor 7A2 Neighboring gene adenosine deaminase RNA specific B1 Neighboring gene uncharacterized LOC117199308 Neighboring gene uncharacterized LOC117199311 Neighboring gene uncharacterized LOC125964450 Neighboring gene uncharacterized LOC125964449

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064563.1 Chromosome 5 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064563.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    148057200..148069488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033418480.2 → XP_033274371.1  GDP-fucose protein O-fucosyltransferase 2 isoform X1

    Conserved Domains (1) summary
    cd11298
    Location:45 → 236
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2

  2. XM_004264619.4 → XP_004264667.1  GDP-fucose protein O-fucosyltransferase 2 isoform X2

    Related
    ENSOORP00010009368.1, ENSOORT00010011151.1
    Conserved Domains (2) summary
    cd11298
    Location:45 → 414
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
    pfam10250
    Location:50 → 408
    O-FucT; GDP-fucose protein O-fucosyltransferase
Nucleotide Protein
Heading Accession and Version

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