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CPM carboxypeptidase M [ Orcinus orca (killer whale) ]

Gene ID: 101286496, updated on 8-Mar-2024

Summary

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Gene symbol
CPM
Gene description
carboxypeptidase M
See related
EnsemblRapid:ENSOORG00010005393
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See CPM in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 11 NC_064569.1 (55269868..55357643, complement)

Chromosome 11 - NC_064569.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E3 Neighboring gene MDM2 proto-oncogene Neighboring gene 40S ribosomal protein S10-like Neighboring gene transfer RNA glycine (anticodon CCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064569.1 Chromosome 11 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase M

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064569.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    55269868..55357643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004281875.4 → XP_004281923.2  carboxypeptidase M

    Related
    ENSOORP00010006250.1, ENSOORT00010007736.1
Nucleotide Protein
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Gene LinkOut

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