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PCCA propionyl-CoA carboxylase subunit alpha [ Orcinus orca (killer whale) ]

Gene ID: 101286376, updated on 8-Mar-2024

Summary

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Gene symbol
PCCA
Gene description
propionyl-CoA carboxylase subunit alpha
See related
EnsemblRapid:ENSOORG00010006973
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See PCCA in Genome Data Viewer
Location:
chromosome: 18
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 18 NC_064576.1 (10145511..10531498, complement)

Chromosome 18 - NC_064576.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125961953 Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene gamma-glutamylamine cyclotransferase Neighboring gene uncharacterized LOC125961955 Neighboring gene Zic family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064576.1 Chromosome 18 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables propionyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
propionyl-CoA carboxylase alpha chain, mitochondrial
Names
propionyl-CoA carboxylase alpha subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064576.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    10145511..10531498 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033435088.2 → XP_033290979.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1

    Related
    ENSOORP00010008420.1, ENSOORT00010010135.1
    Conserved Domains (1) summary
    COG4770
    Location:63 → 730
    PccA; Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]

  2. XM_049701173.1 → XP_049557130.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1

  3. XM_049701172.1 → XP_049557129.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1

  4. XM_049701171.1 → XP_049557128.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1

  5. XM_049701174.1 → XP_049557131.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X2

    Related
    ENSOORP00010008423.1, ENSOORT00010010139.1

  6. XM_049701175.1 → XP_049557132.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X3

  7. XM_033435092.2 → XP_033290983.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X7

    Conserved Domains (1) summary
    cl39082
    Location:1 → 557
    PycA; Pyruvate carboxylase [Energy production and conversion]

  8. XM_049701176.1 → XP_049557133.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X4

  9. XM_049701177.1 → XP_049557134.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X6

  10. XM_033435091.2 → XP_033290982.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X5

    Conserved Domains (2) summary
    cl39082
    Location:63 → 541
    PycA; Pyruvate carboxylase [Energy production and conversion]
    pfam18140
    Location:525 → 590
    PCC_BT; Propionyl-coenzyme A carboxylase BT domain
Nucleotide Protein
Heading Accession and Version

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