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SGCG sarcoglycan gamma [ Orcinus orca (killer whale) ]

Gene ID: 101284033, updated on 8-Mar-2024

Summary

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Gene symbol
SGCG
Gene description
sarcoglycan gamma
See related
EnsemblRapid:ENSOORG00010006718
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See SGCG in Genome Data Viewer
Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 18 NC_064576.1 (76128305..76173133, complement)

Chromosome 18 - NC_064576.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125961979 Neighboring gene TNF receptor superfamily member 19 Neighboring gene uncharacterized LOC117197435 Neighboring gene sacsin molecular chaperone Neighboring gene uncharacterized LOC125961983 Neighboring gene uncharacterized LOC125961980

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064576.1 Chromosome 18 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064576.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    76128305..76173133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033409329.2 → XP_033265220.1  gamma-sarcoglycan isoform X2

    Related
    ENSOORP00010008067.1, ENSOORT00010009732.1
    Conserved Domains (1) summary
    pfam04790
    Location:25 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_049701328.1 → XP_049557285.1  gamma-sarcoglycan isoform X1

  3. XM_049701329.1 → XP_049557286.1  gamma-sarcoglycan isoform X1

  4. XM_004281789.3 → XP_004281837.1  gamma-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  5. XM_049701330.1 → XP_049557287.1  gamma-sarcoglycan isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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