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ATRNL1 attractin like 1 [ Orcinus orca (killer whale) ]

Gene ID: 101283467, updated on 8-Mar-2024

Summary

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Gene symbol
ATRNL1
Gene description
attractin like 1
See related
EnsemblRapid:ENSOORG00010006784
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See ATRNL1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 14 NC_064572.1 (75422403..76128729)

Chromosome 14 - NC_064572.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon ACC) Neighboring gene TruB pseudouridine synthase family member 1 Neighboring gene GDNF family receptor alpha 1 Neighboring gene coiled-coil domain containing 172

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064572.1 Chromosome 14 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
attractin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064572.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    75422403..76128729
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049697036.1 → XP_049552993.1  attractin-like protein 1 isoform X2

  2. XM_049697035.1 → XP_049552992.1  attractin-like protein 1 isoform X1

    Related
    ENSOORP00010008156.1, ENSOORT00010009833.1
Nucleotide Protein
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Gene LinkOut

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