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PGAP3 post-GPI attachment to proteins phospholipase 3 [ Orcinus orca (killer whale) ]

Gene ID: 101283371, updated on 8-Mar-2024

Summary

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Gene symbol
PGAP3
Gene description
post-GPI attachment to proteins phospholipase 3
See related
EnsemblRapid:ENSOORG00010018949
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See PGAP3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 19 NC_064577.1 (42406554..42420465)

Chromosome 19 - NC_064577.1Genomic Context describing neighboring genes Neighboring gene migration and invasion enhancer 1 Neighboring gene erb-b2 receptor tyrosine kinase 2 Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene titin-cap

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064577.1 Chromosome 19 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
post-GPI attachment to proteins factor 3
Names
post-GPI attachment to proteins 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064577.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    42406554..42420465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033411049.2 → XP_033266940.1  post-GPI attachment to proteins factor 3 isoform X3

    Conserved Domains (1) summary
    cl02172
    Location:54 → 186
    Per1; Per1-like family

  2. XM_012537764.3 → XP_012393218.1  post-GPI attachment to proteins factor 3 isoform X2

    Related
    ENSOORP00010024976.1, ENSOORT00010028385.1
    Conserved Domains (1) summary
    pfam04080
    Location:54 → 255
    Per1; Per1-like

  3. XM_033411052.2 → XP_033266943.1  post-GPI attachment to proteins factor 3 isoform X5

    Related
    ENSOORP00010024949.1, ENSOORT00010028356.1
    Conserved Domains (1) summary
    cl02172
    Location:54 → 144
    Per1; Per1-like family

  4. XM_033411051.2 → XP_033266942.1  post-GPI attachment to proteins factor 3 isoform X4

    Conserved Domains (1) summary
    cl02172
    Location:54 → 186
    Per1; Per1-like family

  5. XM_004282731.4 → XP_004282779.1  post-GPI attachment to proteins factor 3 isoform X1

    Related
    ENSOORP00010024967.1, ENSOORT00010028376.1
    Conserved Domains (1) summary
    pfam04080
    Location:54 → 306
    Per1; Per1-like
Nucleotide Protein
Heading Accession and Version

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