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LGALS4 galectin 4 [ Orcinus orca (killer whale) ]

Gene ID: 101281332, updated on 8-Mar-2024

Summary

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Gene symbol
LGALS4
Gene description
galectin 4
See related
EnsemblRapid:ENSOORG00010011291
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See LGALS4 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 20 NC_064578.1 (45944448..45953329, complement)

Chromosome 20 - NC_064578.1Genomic Context describing neighboring genes Neighboring gene galectin-7 Neighboring gene galectin-7 Neighboring gene enoyl-CoA hydratase 1 Neighboring gene heterogeneous nuclear ribonucleoprotein L

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064578.1 Chromosome 20 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064578.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    45944448..45953329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012533532.3 → XP_012388986.1  galectin-4 isoform X2

    Conserved Domains (1) summary
    smart00908
    Location:186 → 309
    Gal-bind_lectin; Galactoside-binding lectin

  2. XM_004271322.4 → XP_004271370.1  galectin-4 isoform X1

    Related
    ENSOORP00010014269.1, ENSOORT00010016638.1
    Conserved Domains (1) summary
    smart00908
    Location:199 → 322
    Gal-bind_lectin; Galactoside-binding lectin

RNA

  1. XR_004483959.2 RNA Sequence

  2. XR_004483958.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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