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HEXD hexosaminidase D [ Orcinus orca (killer whale) ]

Gene ID: 101281007, updated on 8-Mar-2024

Summary

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Gene symbol
HEXD
Gene description
hexosaminidase D
See related
EnsemblRapid:ENSOORG00010021049
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Also known as
HEXDC
Orthologs
human mouse all
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Genomic context

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See HEXD in Genome Data Viewer
Location:
chromosome: 19
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 19 NC_064577.1 (33989537..34007525)

Chromosome 19 - NC_064577.1Genomic Context describing neighboring genes Neighboring gene urotensin 2 receptor Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene cytochrome b-245 chaperone 1 Neighboring gene nuclear prelamin A recognition factor Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064577.1 Chromosome 19 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexosaminidase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064577.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    33989537..34007525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033438817.2 → XP_033294708.1  hexosaminidase D isoform X1

    Related
    ENSOORP00010027977.1, ENSOORT00010031574.1
    Conserved Domains (1) summary
    cd06565
    Location:33 → 347
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  2. XM_049701845.1 → XP_049557802.1  hexosaminidase D isoform X2

RNA

  1. XR_007473395.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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