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COG2 component of oligomeric golgi complex 2 [ Orcinus orca (killer whale) ]

Gene ID: 101280947, updated on 8-Mar-2024

Summary

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Gene symbol
COG2
Gene description
component of oligomeric golgi complex 2
See related
EnsemblRapid:ENSOORG00010003512
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See COG2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 14 NC_064572.1 (8351986..8395255)

Chromosome 14 - NC_064572.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 2 Neighboring gene uncharacterized LOC125961002 Neighboring gene piggyBac transposable element derived 5 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L35-like Neighboring gene angiotensinogen

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064572.1 Chromosome 14 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064572.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    8351986..8395255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033408932.2 → XP_033264823.1  conserved oligomeric Golgi complex subunit 2 isoform X1

    Conserved Domains (2) summary
    pfam06148
    Location:15 → 147
    COG2; COG (conserved oligomeric Golgi) complex component, COG2
    pfam12022
    Location:573 → 700
    DUF3510; Domain of unknown function (DUF3510)

  2. XM_033408934.2 → XP_033264825.1  conserved oligomeric Golgi complex subunit 2 isoform X2

    Conserved Domains (2) summary
    pfam06148
    Location:15 → 147
    COG2; COG (conserved oligomeric Golgi) complex component, COG2
    pfam12022
    Location:572 → 699
    DUF3510; Domain of unknown function (DUF3510)

  3. XM_004281566.3 → XP_004281614.1  conserved oligomeric Golgi complex subunit 2 isoform X3

    Related
    ENSOORP00010003925.1, ENSOORT00010005008.1
    Conserved Domains (2) summary
    pfam06148
    Location:15 → 147
    COG2; COG (conserved oligomeric Golgi) complex component, COG2
    pfam12022
    Location:574 → 700
    DUF3510; Domain of unknown function (DUF3510)

  4. XM_012537357.3 → XP_012392811.1  conserved oligomeric Golgi complex subunit 2 isoform X4

    Conserved Domains (2) summary
    pfam06148
    Location:15 → 147
    COG2; COG (conserved oligomeric Golgi) complex component, COG2
    pfam12022
    Location:573 → 699
    DUF3510; Domain of unknown function (DUF3510)

  5. XM_033408937.2 → XP_033264828.1  conserved oligomeric Golgi complex subunit 2 isoform X7

    Conserved Domains (2) summary
    pfam06148
    Location:15 → 147
    COG2; COG (conserved oligomeric Golgi) complex component, COG2
    pfam12022
    Location:455 → 582
    DUF3510; Domain of unknown function (DUF3510)

  6. XM_033408935.2 → XP_033264826.1  conserved oligomeric Golgi complex subunit 2 isoform X5

    Conserved Domains (2) summary
    pfam06148
    Location:15 → 147
    COG2; COG (conserved oligomeric Golgi) complex component, COG2
    pfam12022
    Location:484 → 611
    DUF3510; Domain of unknown function (DUF3510)

  7. XM_033408936.2 → XP_033264827.1  conserved oligomeric Golgi complex subunit 2 isoform X6

    Conserved Domains (1) summary
    pfam12022
    Location:457 → 584
    DUF3510; Domain of unknown function (DUF3510)
Nucleotide Protein
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