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MANBA mannosidase beta [ Orcinus orca (killer whale) ]

Gene ID: 101280266, updated on 8-Mar-2024

Summary

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Gene symbol
MANBA
Gene description
mannosidase beta
See related
EnsemblRapid:ENSOORG00010022660
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See MANBA in Genome Data Viewer
Location:
chromosome: 4
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 4 NC_064562.1 (21823826..21968722, complement)

Chromosome 4 - NC_064562.1Genomic Context describing neighboring genes Neighboring gene 60S ribosome subunit biogenesis protein NIP7 homolog Neighboring gene tubulin alpha chain-like Neighboring gene nuclear factor kappa B subunit 1 Neighboring gene uncharacterized LOC125964171 Neighboring gene uncharacterized LOC117195880 Neighboring gene ubiquitin conjugating enzyme E2 D3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064562.1 Chromosome 4 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-mannosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064562.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    21823826..21968722 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004263572.4 → XP_004263620.2  beta-mannosidase

    Related
    ENSOORP00010030068.1, ENSOORT00010033925.1

RNA

  1. XR_007476922.1 RNA Sequence

  2. XR_007476923.1 RNA Sequence

  3. XR_007476921.1 RNA Sequence

  4. XR_007476918.1 RNA Sequence

  5. XR_007476919.1 RNA Sequence

  6. XR_007476920.1 RNA Sequence

  7. XR_007476916.1 RNA Sequence

  8. XR_007476917.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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